Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.73■□□□□ 0.11
Trim33Q99PP7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.73■□□□□ 0.11
Trim33Q99PP7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Mir3081-201ENSMUST00000175305 84 ntBASIC15.73■□□□□ 0.11
Trim33Q99PP7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Gm13312-201ENSMUST00000119631 718 ntBASIC15.72■□□□□ 0.11
Trim33Q99PP7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Gm17807-201ENSMUST00000186869 298 ntBASIC15.72■□□□□ 0.11
Trim33Q99PP7 Ank2-226ENSMUST00000189368 339 ntBASIC15.72■□□□□ 0.11
Trim33Q99PP7 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.72■□□□□ 0.11
Trim33Q99PP7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.72■□□□□ 0.11
Trim33Q99PP7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim33Q99PP7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim33Q99PP7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.71■□□□□ 0.11
Trim33Q99PP7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim33Q99PP7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim33Q99PP7 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.71■□□□□ 0.1
Trim33Q99PP7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim33Q99PP7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim33Q99PP7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim33Q99PP7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim33Q99PP7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms