Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Gm17837-201ENSMUST00000186435 985 ntBASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh23Q99PF4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Syt7-205ENSMUST00000224135 1557 ntBASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh23Q99PF4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Gm16198-201ENSMUST00000118766 670 ntBASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Gm18057-201ENSMUST00000208220 503 ntBASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh23Q99PF4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh23Q99PF4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.02■□□□□ 0.15
Cdh23Q99PF4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh23Q99PF4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms