Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 BC037039-201ENSMUST00000192003 2205 ntBASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf111Q99ML9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf111Q99ML9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf111Q99ML9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.38■□□□□ 0.05
Rnf111Q99ML9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Rnf111Q99ML9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Gm9013-201ENSMUST00000132939 882 ntBASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Gm6659-201ENSMUST00000174752 547 ntBASIC15.37■□□□□ 0.05
Rnf111Q99ML9 Gm23634-201ENSMUST00000175071 91 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms