Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.08■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cttnbp2nlQ99LJ0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm11539-201ENSMUST00000119837 557 ntBASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm27463-201ENSMUST00000183569 57 ntBASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm44450-201ENSMUST00000199528 114 ntBASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.06■□□□□ 0.16
Cttnbp2nlQ99LJ0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm715-201ENSMUST00000117865 831 ntBASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cttnbp2nlQ99LJ0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cttnbp2nlQ99LJ0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cttnbp2nlQ99LJ0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cttnbp2nlQ99LJ0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms