Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lims1Q99JW4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lims1Q99JW4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lims1Q99JW4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lims1Q99JW4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lims1Q99JW4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lims1Q99JW4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lims1Q99JW4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lims1Q99JW4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lims1Q99JW4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Gm6257-201ENSMUST00000163864 910 ntBASIC14.46□□□□□ -0.09
Lims1Q99JW4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.46□□□□□ -0.09
Lims1Q99JW4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lims1Q99JW4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Lims1Q99JW4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lims1Q99JW4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Lims1Q99JW4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lims1Q99JW4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Lims1Q99JW4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Gm11355-201ENSMUST00000121120 306 ntBASIC14.45□□□□□ -0.1
Lims1Q99JW4 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.45□□□□□ -0.1
Lims1Q99JW4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Gm22697-201ENSMUST00000175194 63 ntBASIC14.45□□□□□ -0.1
Lims1Q99JW4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lims1Q99JW4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lims1Q99JW4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Gm10231-201ENSMUST00000181584 441 ntBASIC14.44□□□□□ -0.1
Lims1Q99JW4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Gm10175-202ENSMUST00000208752 441 ntBASIC14.44□□□□□ -0.1
Lims1Q99JW4 Gm18032-201ENSMUST00000222541 538 ntBASIC14.44□□□□□ -0.1
Lims1Q99JW4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.44□□□□□ -0.1
Lims1Q99JW4 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.43□□□□□ -0.1
Lims1Q99JW4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms