Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Gm6257-201ENSMUST00000163864 910 ntBASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha11Q91Y19 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Gm18622-201ENSMUST00000219361 595 ntBASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha11Q91Y19 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Gm25990-201ENSMUST00000102440 86 ntBASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha11Q91Y19 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha11Q91Y19 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms