Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Rps4l-201ENSMUST00000071745 943 ntBASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb2Q91Y00 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Gm4459-201ENSMUST00000118750 468 ntBASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Gm6376-201ENSMUST00000209407 580 ntBASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb2Q91Y00 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Gm8655-201ENSMUST00000221159 852 ntBASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb2Q91Y00 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm13884-201ENSMUST00000118103 829 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm8825-201ENSMUST00000182565 998 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm4518-201ENSMUST00000182638 718 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb2Q91Y00 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms