Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Gm9682-201ENSMUST00000197505 556 ntBASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Pcdhb5Q91XZ5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Gm18489-201ENSMUST00000172565 551 ntBASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb5Q91XZ5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb5Q91XZ5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Gm26308-201ENSMUST00000157768 69 ntBASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhb5Q91XZ5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Gm17271-201ENSMUST00000165535 355 ntBASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhb5Q91XZ5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb5Q91XZ5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb5Q91XZ5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb5Q91XZ5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb5Q91XZ5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms