Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Gm25406-201ENSMUST00000157599 105 ntBASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Gm6443-201ENSMUST00000203599 874 ntBASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga9Q91XX9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Pcdhga9Q91XX9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Gm43514-201ENSMUST00000198852 424 ntBASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga9Q91XX9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Gm6257-201ENSMUST00000163864 910 ntBASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhga9Q91XX9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms