Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgc5Q91XW9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgc5Q91XW9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgc5Q91XW9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgc5Q91XW9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhgc5Q91XW9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgc5Q91XW9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Gm14140-201ENSMUST00000119999 995 ntBASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgc5Q91XW9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Gm24513-201ENSMUST00000174964 138 ntBASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Gm27397-201ENSMUST00000184997 107 ntBASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Gm6550-201ENSMUST00000187574 993 ntBASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgc5Q91XW9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Gm2756-201ENSMUST00000195851 400 ntBASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgc5Q91XW9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgc5Q91XW9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgc5Q91XW9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhgc5Q91XW9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgc5Q91XW9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgc5Q91XW9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhgc5Q91XW9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.02■□□□□ 0.47
Pcdhgc5Q91XW9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc5Q91XW9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Pcdhgc5Q91XW9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhgc5Q91XW9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc5Q91XW9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc5Q91XW9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgc5Q91XW9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms