Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.12■□□□□ 0.49
Trex1Q91XB0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trex1Q91XB0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.12■□□□□ 0.49
Trex1Q91XB0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Haglr-201ENSMUST00000100000 2085 ntBASIC18.12■□□□□ 0.49
Trex1Q91XB0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Trex1Q91XB0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trex1Q91XB0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trex1Q91XB0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.11■□□□□ 0.49
Trex1Q91XB0 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.11■□□□□ 0.49
Trex1Q91XB0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trex1Q91XB0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.1■□□□□ 0.49
Trex1Q91XB0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.1■□□□□ 0.49
Trex1Q91XB0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Gm13597-201ENSMUST00000121239 375 ntBASIC18.1■□□□□ 0.49
Trex1Q91XB0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.1■□□□□ 0.49
Trex1Q91XB0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.1■□□□□ 0.49
Trex1Q91XB0 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.1■□□□□ 0.49
Trex1Q91XB0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.1■□□□□ 0.49
Trex1Q91XB0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trex1Q91XB0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trex1Q91XB0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trex1Q91XB0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trex1Q91XB0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trex1Q91XB0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trex1Q91XB0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trex1Q91XB0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.08■□□□□ 0.49
Trex1Q91XB0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trex1Q91XB0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trex1Q91XB0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trex1Q91XB0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trex1Q91XB0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trex1Q91XB0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.08■□□□□ 0.48
Trex1Q91XB0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms