Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Gm14659-201ENSMUST00000117667 843 ntBASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Gm12644-201ENSMUST00000119935 606 ntBASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Gm25745-201ENSMUST00000174945 133 ntBASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Gm37604-201ENSMUST00000191749 1272 ntBASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb17Q91VD8 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Gm22119-201ENSMUST00000175594 99 ntBASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Gm38018-201ENSMUST00000195651 540 ntBASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 AC154252.1-201ENSMUST00000226041 473 ntBASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 AC154616.1-201ENSMUST00000226995 804 ntBASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb17Q91VD8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Gm27741-201ENSMUST00000185060 237 ntBASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 CT009713.1-201ENSMUST00000224828 853 ntBASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb17Q91VD8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb17Q91VD8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms