Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Gm43799-201ENSMUST00000201845 579 ntBASIC16.43■□□□□ 0.22
Trim60Q8VI40 Gm18101-201ENSMUST00000215769 548 ntBASIC16.43■□□□□ 0.22
Trim60Q8VI40 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.43■□□□□ 0.22
Trim60Q8VI40 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim60Q8VI40 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Gm22697-201ENSMUST00000175194 63 ntBASIC16.42■□□□□ 0.22
Trim60Q8VI40 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.42■□□□□ 0.22
Trim60Q8VI40 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim60Q8VI40 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.41■□□□□ 0.22
Trim60Q8VI40 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim60Q8VI40 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.4■□□□□ 0.22
Trim60Q8VI40 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim60Q8VI40 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim60Q8VI40 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms