Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cspg4Q8VHY0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cspg4Q8VHY0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.58□□□□□ -0.23
Cspg4Q8VHY0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.58□□□□□ -0.23
Cspg4Q8VHY0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cspg4Q8VHY0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cspg4Q8VHY0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cspg4Q8VHY0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cspg4Q8VHY0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cspg4Q8VHY0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cspg4Q8VHY0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cspg4Q8VHY0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Mir7085-201ENSMUST00000184353 66 ntBASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Gm7730-201ENSMUST00000212486 454 ntBASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cspg4Q8VHY0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Gm7774-201ENSMUST00000200064 533 ntBASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cspg4Q8VHY0 Gm9682-201ENSMUST00000197505 556 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms