Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Phf7-203ENSMUST00000226565 1971 ntBASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh18Q8VHR0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh18Q8VHR0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh18Q8VHR0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms