Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab40cQ8VHQ4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab40cQ8VHQ4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab40cQ8VHQ4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.99□□□□□ -0.33
Rab40cQ8VHQ4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab40cQ8VHQ4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rab40cQ8VHQ4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab40cQ8VHQ4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab40cQ8VHQ4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab40cQ8VHQ4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab40cQ8VHQ4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab40cQ8VHQ4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Gm44450-201ENSMUST00000199528 114 ntBASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rab40cQ8VHQ4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab40cQ8VHQ4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab40cQ8VHQ4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab40cQ8VHQ4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab40cQ8VHQ4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rab40cQ8VHQ4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rab40cQ8VHQ4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rab40cQ8VHQ4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.96□□□□□ -0.33
Rab40cQ8VHQ4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rab40cQ8VHQ4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rab40cQ8VHQ4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab40cQ8VHQ4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Rab40cQ8VHQ4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab40cQ8VHQ4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab40cQ8VHQ4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab40cQ8VHQ4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Rab40cQ8VHQ4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab40cQ8VHQ4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rab40cQ8VHQ4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rab40cQ8VHQ4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rab40cQ8VHQ4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Rab40cQ8VHQ4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rab40cQ8VHQ4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rab40cQ8VHQ4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab40cQ8VHQ4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab40cQ8VHQ4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rab40cQ8VHQ4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rab40cQ8VHQ4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms