Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rpa1Q8VEE4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16■□□□□ 0.15
Rpa1Q8VEE4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rpa1Q8VEE4 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Gm22240-201ENSMUST00000175225 82 ntBASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rpa1Q8VEE4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Gm10698-201ENSMUST00000182663 604 ntBASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Gm18115-201ENSMUST00000221209 621 ntBASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
Rpa1Q8VEE4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rpa1Q8VEE4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms