Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Uhrf1Q8VDF2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Uhrf1Q8VDF2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Gm13365-201ENSMUST00000121188 973 ntBASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Gm5312-201ENSMUST00000203728 547 ntBASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Uhrf1Q8VDF2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Gm44335-201ENSMUST00000196879 141 ntBASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Gm44297-201ENSMUST00000198304 141 ntBASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Gm44346-201ENSMUST00000198851 141 ntBASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Uhrf1Q8VDF2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms