Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgms1Q8VCQ6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgms1Q8VCQ6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Gm27357-201ENSMUST00000183754 135 ntBASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgms1Q8VCQ6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Sgms1Q8VCQ6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sgms1Q8VCQ6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sgms1Q8VCQ6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Sgms1Q8VCQ6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sgms1Q8VCQ6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sgms1Q8VCQ6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sgms1Q8VCQ6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Sgms1Q8VCQ6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sgms1Q8VCQ6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.08■□□□□ 0.32
Sgms1Q8VCQ6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms