Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
Rpap2Q8VC34 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.39■□□□□ 0.38
Rpap2Q8VC34 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpap2Q8VC34 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Gm12644-201ENSMUST00000119935 606 ntBASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Gm7506-201ENSMUST00000207758 815 ntBASIC17.38■□□□□ 0.37
Rpap2Q8VC34 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpap2Q8VC34 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Gm12497-201ENSMUST00000138778 237 ntBASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpap2Q8VC34 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpap2Q8VC34 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Gm4459-201ENSMUST00000118750 468 ntBASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpap2Q8VC34 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms