Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp33Q8R5K2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp33Q8R5K2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp33Q8R5K2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp33Q8R5K2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp33Q8R5K2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp33Q8R5K2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Gm44492-201ENSMUST00000197012 141 ntBASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp33Q8R5K2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Gm8344-201ENSMUST00000119813 856 ntBASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp33Q8R5K2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Gm7787-201ENSMUST00000216858 688 ntBASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Usp33Q8R5K2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp33Q8R5K2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms