Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Mir5131-201ENSMUST00000175426 93 ntBASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Cdt1Q8R4E9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdt1Q8R4E9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdt1Q8R4E9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdt1Q8R4E9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdt1Q8R4E9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdt1Q8R4E9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdt1Q8R4E9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdt1Q8R4E9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdt1Q8R4E9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Gm7862-201ENSMUST00000121461 292 ntBASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdt1Q8R4E9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Gm6296-201ENSMUST00000222599 943 ntBASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdt1Q8R4E9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms