Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Gm12527-201ENSMUST00000117967 564 ntBASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Gm13186-201ENSMUST00000118031 316 ntBASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Timm23-208ENSMUST00000226683 750 ntBASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc58Q8R3Q6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc58Q8R3Q6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Gm18115-201ENSMUST00000221209 621 ntBASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc58Q8R3Q6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc58Q8R3Q6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms