Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim29Q8R2Q0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Rprl3-201ENSMUST00000157400 290 ntBASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim29Q8R2Q0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Gm27704-201ENSMUST00000185094 107 ntBASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim29Q8R2Q0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Gm7284-201ENSMUST00000131667 944 ntBASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim29Q8R2Q0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Gm14859-201ENSMUST00000117752 357 ntBASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim29Q8R2Q0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms