Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 Gm13216-201ENSMUST00000117145 591 ntBASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp7Q8R1T1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 AC159295.1-201ENSMUST00000225326 940 ntBASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp7Q8R1T1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp7Q8R1T1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp7Q8R1T1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Chmp7Q8R1T1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.21■□□□□ 0.83
Chmp7Q8R1T1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp7Q8R1T1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.21■□□□□ 0.83
Chmp7Q8R1T1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp7Q8R1T1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp7Q8R1T1 Chchd1-203ENSMUST00000224633 557 ntBASIC20.21■□□□□ 0.83
Chmp7Q8R1T1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp7Q8R1T1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.2■□□□□ 0.83
Chmp7Q8R1T1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Chmp7Q8R1T1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.2■□□□□ 0.82
Chmp7Q8R1T1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Grk6-207ENSMUST00000225925 2769 ntBASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp7Q8R1T1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp7Q8R1T1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms