Protein–RNA interactions for Protein: Q8QZY9

Sf3b4, Splicing factor 3B subunit 4, mousemouse

Known RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b4Q8QZY9 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b4Q8QZY9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b4Q8QZY9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b4Q8QZY9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Gm27741-201ENSMUST00000185060 237 ntBASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b4Q8QZY9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b4Q8QZY9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms