Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Gm27306-201ENSMUST00000183970 107 ntBASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx54Q8K4L0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Gm25287-201ENSMUST00000103846 110 ntBASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Gm22918-201ENSMUST00000103855 110 ntBASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC20.67■□□□□ 0.9
Ddx54Q8K4L0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Gm12008-201ENSMUST00000117791 755 ntBASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Gm8969-201ENSMUST00000199694 526 ntBASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx54Q8K4L0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ddx54Q8K4L0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ddx54Q8K4L0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.64■□□□□ 0.9
Ddx54Q8K4L0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ddx54Q8K4L0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 AC132467.2-202ENSMUST00000227726 559 ntBASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Gm15222-202ENSMUST00000228667 1726 ntBASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx54Q8K4L0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms