Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Efs-202ENSMUST00000227037 2540 ntBASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ebf4Q8K4J2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Gm36967-201ENSMUST00000193814 266 ntBASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ebf4Q8K4J2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ebf4Q8K4J2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ebf4Q8K4J2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms