Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnt1Q8K1J6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Gm6257-201ENSMUST00000163864 910 ntBASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnt1Q8K1J6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Gm7284-201ENSMUST00000131667 944 ntBASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trnt1Q8K1J6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Gm25406-201ENSMUST00000157599 105 ntBASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Gm44454-201ENSMUST00000198541 138 ntBASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnt1Q8K1J6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms