Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lin9Q8C735 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lin9Q8C735 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lin9Q8C735 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Lin9Q8C735 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lin9Q8C735 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lin9Q8C735 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Lin9Q8C735 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lin9Q8C735 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.31■□□□□ 0.36
Lin9Q8C735 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.31■□□□□ 0.36
Lin9Q8C735 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Lin9Q8C735 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lin9Q8C735 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.31■□□□□ 0.36
Lin9Q8C735 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lin9Q8C735 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lin9Q8C735 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lin9Q8C735 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Lin9Q8C735 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lin9Q8C735 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lin9Q8C735 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lin9Q8C735 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.31■□□□□ 0.36
Lin9Q8C735 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.31■□□□□ 0.36
Lin9Q8C735 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lin9Q8C735 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lin9Q8C735 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lin9Q8C735 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Lin9Q8C735 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lin9Q8C735 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lin9Q8C735 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lin9Q8C735 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Lin9Q8C735 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Gm12644-201ENSMUST00000119935 606 ntBASIC17.3■□□□□ 0.36
Lin9Q8C735 Gm11452-201ENSMUST00000122376 690 ntBASIC17.3■□□□□ 0.36
Lin9Q8C735 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.3■□□□□ 0.36
Lin9Q8C735 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Gm43514-201ENSMUST00000198852 424 ntBASIC17.3■□□□□ 0.36
Lin9Q8C735 Gm6443-201ENSMUST00000203599 874 ntBASIC17.3■□□□□ 0.36
Lin9Q8C735 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lin9Q8C735 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Lin9Q8C735 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.3■□□□□ 0.36
Lin9Q8C735 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lin9Q8C735 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.29■□□□□ 0.36
Lin9Q8C735 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.29■□□□□ 0.36
Lin9Q8C735 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.29■□□□□ 0.36
Lin9Q8C735 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.29■□□□□ 0.36
Lin9Q8C735 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.29■□□□□ 0.36
Lin9Q8C735 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Lin9Q8C735 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Lin9Q8C735 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.29■□□□□ 0.36
Lin9Q8C735 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lin9Q8C735 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lin9Q8C735 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.29■□□□□ 0.36
Lin9Q8C735 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin9Q8C735 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lin9Q8C735 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin9Q8C735 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin9Q8C735 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lin9Q8C735 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin9Q8C735 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Lin9Q8C735 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin9Q8C735 Gm13312-201ENSMUST00000119631 718 ntBASIC17.28■□□□□ 0.36
Lin9Q8C735 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.28■□□□□ 0.36
Lin9Q8C735 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.28■□□□□ 0.36
Lin9Q8C735 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lin9Q8C735 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Lin9Q8C735 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Lin9Q8C735 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Lin9Q8C735 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.28■□□□□ 0.36
Lin9Q8C735 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lin9Q8C735 Gm18195-201ENSMUST00000207604 706 ntBASIC17.28■□□□□ 0.36
Lin9Q8C735 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.28■□□□□ 0.36
Lin9Q8C735 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms