Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 App-207ENSMUST00000227737 2827 ntBASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Gm21814-202ENSMUST00000203277 873 ntBASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tsen54Q8C2A2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tsen54Q8C2A2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Gm12085-201ENSMUST00000119263 940 ntBASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Gm5417-201ENSMUST00000079706 384 ntBASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tsen54Q8C2A2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms