Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps9d1Q8C190 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Gm6659-201ENSMUST00000174752 547 ntBASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps9d1Q8C190 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.88□□□□□ -0.03
Vps9d1Q8C190 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vps9d1Q8C190 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps9d1Q8C190 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps9d1Q8C190 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms