Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sh3rf3Q8C120 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Gm13312-201ENSMUST00000119631 718 ntBASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3rf3Q8C120 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3rf3Q8C120 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3rf3Q8C120 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.52■□□□□ 0.23
Sh3rf3Q8C120 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3rf3Q8C120 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3rf3Q8C120 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Mir3081-201ENSMUST00000175305 84 ntBASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sh3rf3Q8C120 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3rf3Q8C120 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms