Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Gm11764-201ENSMUST00000120221 623 ntBASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh3rf2Q8BZT2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Gm9727-201ENSMUST00000161387 555 ntBASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh3rf2Q8BZT2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Gm2213-201ENSMUST00000197485 688 ntBASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh3rf2Q8BZT2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf2Q8BZT2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf2Q8BZT2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf2Q8BZT2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.02■□□□□ 0.15
Sh3rf2Q8BZT2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf2Q8BZT2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf2Q8BZT2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf2Q8BZT2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf2Q8BZT2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Sh3rf2Q8BZT2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sh3rf2Q8BZT2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sh3rf2Q8BZT2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms