Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Gm7153-201ENSMUST00000117092 455 ntBASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube3dQ8BX13 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ube3dQ8BX13 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ube3dQ8BX13 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ube3dQ8BX13 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.08□□□□□ -0.16
Ube3dQ8BX13 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.08□□□□□ -0.16
Ube3dQ8BX13 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.08□□□□□ -0.16
Ube3dQ8BX13 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.08□□□□□ -0.16
Ube3dQ8BX13 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ube3dQ8BX13 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3dQ8BX13 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3dQ8BX13 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3dQ8BX13 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3dQ8BX13 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ube3dQ8BX13 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ube3dQ8BX13 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.06□□□□□ -0.16
Ube3dQ8BX13 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ube3dQ8BX13 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms