Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gm6659-201ENSMUST00000174752 547 ntBASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ppp1r3eQ8BRJ4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gm13436-201ENSMUST00000120418 567 ntBASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gm16061-201ENSMUST00000122167 857 ntBASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gm13474-201ENSMUST00000122466 815 ntBASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gm7889-201ENSMUST00000185591 958 ntBASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ppp1r3eQ8BRJ4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gm13559-201ENSMUST00000120476 863 ntBASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ppp1r3eQ8BRJ4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ppp1r3eQ8BRJ4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms