Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scfd1Q8BRF7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scfd1Q8BRF7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scfd1Q8BRF7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scfd1Q8BRF7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Gm18489-201ENSMUST00000172565 551 ntBASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scfd1Q8BRF7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Gm9682-201ENSMUST00000197505 556 ntBASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scfd1Q8BRF7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Gm7787-201ENSMUST00000216858 688 ntBASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scfd1Q8BRF7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Gm27300-201ENSMUST00000184085 97 ntBASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Gm27335-201ENSMUST00000184758 97 ntBASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Scfd1Q8BRF7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms