Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.32■□□□□ 0.2
Suds3Q8BR65 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Suds3Q8BR65 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.31■□□□□ 0.2
Suds3Q8BR65 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Suds3Q8BR65 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.3■□□□□ 0.2
Suds3Q8BR65 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Suds3Q8BR65 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Gm17807-201ENSMUST00000186869 298 ntBASIC16.29■□□□□ 0.2
Suds3Q8BR65 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Suds3Q8BR65 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Suds3Q8BR65 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms