Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Gm8655-201ENSMUST00000221159 852 ntBASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nhlrc1Q8BR37 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Gm7230-201ENSMUST00000173026 815 ntBASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Mir5131-201ENSMUST00000175426 93 ntBASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhlrc1Q8BR37 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Gm25990-201ENSMUST00000102440 86 ntBASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Gm12350-201ENSMUST00000121208 462 ntBASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc1Q8BR37 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms