Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2bQ8BJF9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2bQ8BJF9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
Chmp2bQ8BJF9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2bQ8BJF9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2bQ8BJF9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
Chmp2bQ8BJF9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2bQ8BJF9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.27■□□□□ 0.19
Chmp2bQ8BJF9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2bQ8BJF9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2bQ8BJF9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2bQ8BJF9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2bQ8BJF9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Gm45058-201ENSMUST00000205810 766 ntBASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Gm18959-201ENSMUST00000208954 655 ntBASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chmp2bQ8BJF9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Gm43799-201ENSMUST00000201845 579 ntBASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2bQ8BJF9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2bQ8BJF9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms