Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh20Q8BIZ0 Phf7-203ENSMUST00000226565 1971 ntBASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh20Q8BIZ0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Gm27704-201ENSMUST00000185094 107 ntBASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh20Q8BIZ0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 Gm45328-201ENSMUST00000210942 917 ntBASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 App-207ENSMUST00000227737 2827 ntBASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh20Q8BIZ0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh20Q8BIZ0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh20Q8BIZ0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms