Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim23Q8BGX0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Gm8097-201ENSMUST00000117903 829 ntBASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Gm13884-201ENSMUST00000118103 829 ntBASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim23Q8BGX0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Gm7862-201ENSMUST00000121461 292 ntBASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Gm4535-201ENSMUST00000182274 558 ntBASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Gm6376-201ENSMUST00000209407 580 ntBASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Gm18622-201ENSMUST00000219361 595 ntBASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Gm10355-201ENSMUST00000097146 517 ntBASIC15.27■□□□□ 0.04
Trim23Q8BGX0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim23Q8BGX0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim23Q8BGX0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim23Q8BGX0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim23Q8BGX0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim23Q8BGX0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim23Q8BGX0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim23Q8BGX0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 Gm11780-201ENSMUST00000136880 516 ntBASIC15.26■□□□□ 0.03
Trim23Q8BGX0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.26■□□□□ 0.03
Trim23Q8BGX0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms