Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samm50Q8BGH2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Ank2-226ENSMUST00000189368 339 ntBASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samm50Q8BGH2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.59■□□□□ 0.57
Samm50Q8BGH2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Samm50Q8BGH2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.58■□□□□ 0.57
Samm50Q8BGH2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.58■□□□□ 0.57
Samm50Q8BGH2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Samm50Q8BGH2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Samm50Q8BGH2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Samm50Q8BGH2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Samm50Q8BGH2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.58■□□□□ 0.57
Samm50Q8BGH2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Samm50Q8BGH2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Samm50Q8BGH2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Samm50Q8BGH2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms