Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.47■□□□□ 0.07
Trim50Q810I2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim50Q810I2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.47■□□□□ 0.07
Trim50Q810I2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trim50Q810I2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trim50Q810I2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.46■□□□□ 0.07
Trim50Q810I2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.46■□□□□ 0.07
Trim50Q810I2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.46■□□□□ 0.07
Trim50Q810I2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.46■□□□□ 0.07
Trim50Q810I2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trim50Q810I2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.46■□□□□ 0.07
Trim50Q810I2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.46■□□□□ 0.07
Trim50Q810I2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim50Q810I2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
Trim50Q810I2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim50Q810I2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim50Q810I2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Trim50Q810I2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim50Q810I2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trim50Q810I2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim50Q810I2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim50Q810I2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trim50Q810I2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trim50Q810I2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim50Q810I2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim50Q810I2 Rprl3-201ENSMUST00000157400 290 ntBASIC15.45■□□□□ 0.06
Trim50Q810I2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.45■□□□□ 0.06
Trim50Q810I2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.45■□□□□ 0.06
Trim50Q810I2 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.45■□□□□ 0.06
Trim50Q810I2 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.45■□□□□ 0.06
Trim50Q810I2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.45■□□□□ 0.06
Trim50Q810I2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim50Q810I2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Trim50Q810I2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trim50Q810I2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim50Q810I2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim50Q810I2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim50Q810I2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trim50Q810I2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim50Q810I2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim50Q810I2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Trim50Q810I2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Trim50Q810I2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim50Q810I2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Trim50Q810I2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim50Q810I2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim50Q810I2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.44■□□□□ 0.06
Trim50Q810I2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim50Q810I2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.44■□□□□ 0.06
Trim50Q810I2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim50Q810I2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim50Q810I2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.43■□□□□ 0.06
Trim50Q810I2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim50Q810I2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim50Q810I2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms