Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk3bQ80YF6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3bQ80YF6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3bQ80YF6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3bQ80YF6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms