Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm8825-201ENSMUST00000182565 998 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm4518-201ENSMUST00000182638 718 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm43575-201ENSMUST00000196420 516 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.11■□□□□ 0.01
Vrk1Q80X41 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.11■□□□□ 0.01
Vrk1Q80X41 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.1■□□□□ 0.01
Vrk1Q80X41 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.1■□□□□ 0.01
Vrk1Q80X41 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vrk1Q80X41 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vrk1Q80X41 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vrk1Q80X41 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Vrk1Q80X41 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms