Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf40bQ80W14 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf40bQ80W14 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Prpf40bQ80W14 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf40bQ80W14 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf40bQ80W14 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf40bQ80W14 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf40bQ80W14 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf40bQ80W14 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf40bQ80W14 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf40bQ80W14 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.25■□□□□ 0.51
Prpf40bQ80W14 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf40bQ80W14 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Chchd1-203ENSMUST00000224633 557 ntBASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Prpf40bQ80W14 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.23■□□□□ 0.51
Prpf40bQ80W14 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Mir3113-201ENSMUST00000175478 76 ntBASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.23■□□□□ 0.51
Prpf40bQ80W14 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms