Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim62Q80V85 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim62Q80V85 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Trim62Q80V85 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim62Q80V85 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim62Q80V85 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Gm18622-201ENSMUST00000219361 595 ntBASIC16.39■□□□□ 0.21
Trim62Q80V85 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.39■□□□□ 0.21
Trim62Q80V85 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim62Q80V85 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim62Q80V85 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.38■□□□□ 0.21
Trim62Q80V85 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trim62Q80V85 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.38■□□□□ 0.21
Trim62Q80V85 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim62Q80V85 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trim62Q80V85 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Trim62Q80V85 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.37■□□□□ 0.21
Trim62Q80V85 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.37■□□□□ 0.21
Trim62Q80V85 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim62Q80V85 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim62Q80V85 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Trim62Q80V85 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.37■□□□□ 0.21
Trim62Q80V85 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.37■□□□□ 0.21
Trim62Q80V85 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.37■□□□□ 0.21
Trim62Q80V85 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trim62Q80V85 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim62Q80V85 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trim62Q80V85 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trim62Q80V85 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Gm6376-201ENSMUST00000209407 580 ntBASIC16.36■□□□□ 0.21
Trim62Q80V85 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.36■□□□□ 0.21
Trim62Q80V85 Gm19164-201ENSMUST00000210667 640 ntBASIC16.36■□□□□ 0.21
Trim62Q80V85 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trim62Q80V85 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Trim62Q80V85 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim62Q80V85 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Trim62Q80V85 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim62Q80V85 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trim62Q80V85 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim62Q80V85 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim62Q80V85 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim62Q80V85 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.35■□□□□ 0.21
Trim62Q80V85 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim62Q80V85 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.35■□□□□ 0.21
Trim62Q80V85 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms