Protein–RNA interactions for Protein: Q80UJ7

Rab3gap1, Rab3 GTPase-activating protein catalytic subunit, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3gap1Q80UJ7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Gm11779-201ENSMUST00000118541 368 ntBASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab3gap1Q80UJ7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab3gap1Q80UJ7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Gm5682-201ENSMUST00000173402 505 ntBASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Gm5867-201ENSMUST00000063197 592 ntBASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab3gap1Q80UJ7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Gm11594-201ENSMUST00000122313 162 ntBASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.22■□□□□ 0.67
Rab3gap1Q80UJ7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab3gap1Q80UJ7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab3gap1Q80UJ7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab3gap1Q80UJ7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab3gap1Q80UJ7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab3gap1Q80UJ7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab3gap1Q80UJ7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Rab3gap1Q80UJ7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rab3gap1Q80UJ7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms