Protein–RNA interactions for Protein: Q80TR4

Slit1, Slit homolog 1 protein, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slit1Q80TR4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Gm14722-201ENSMUST00000118943 689 ntBASIC20.12■□□□□ 0.81
Slit1Q80TR4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slit1Q80TR4 AC166341.4-201ENSMUST00000220625 123 ntBASIC20.12■□□□□ 0.81
Slit1Q80TR4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slit1Q80TR4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.12■□□□□ 0.81
Slit1Q80TR4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC20.12■□□□□ 0.81
Slit1Q80TR4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slit1Q80TR4 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.12■□□□□ 0.81
Slit1Q80TR4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slit1Q80TR4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC20.11■□□□□ 0.81
Slit1Q80TR4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.11■□□□□ 0.81
Slit1Q80TR4 Gm10154-201ENSMUST00000084445 354 ntBASIC20.11■□□□□ 0.81
Slit1Q80TR4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slit1Q80TR4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slit1Q80TR4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Gm10499-201ENSMUST00000174094 934 ntBASIC20.1■□□□□ 0.81
Slit1Q80TR4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slit1Q80TR4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slit1Q80TR4 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.09■□□□□ 0.81
Slit1Q80TR4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slit1Q80TR4 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.09■□□□□ 0.81
Slit1Q80TR4 Gm12428-201ENSMUST00000119844 727 ntBASIC20.09■□□□□ 0.81
Slit1Q80TR4 Gm15693-201ENSMUST00000120470 637 ntBASIC20.09■□□□□ 0.81
Slit1Q80TR4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Slit1Q80TR4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slit1Q80TR4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slit1Q80TR4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slit1Q80TR4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Slit1Q80TR4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.09■□□□□ 0.81
Slit1Q80TR4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.09■□□□□ 0.81
Slit1Q80TR4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Slit1Q80TR4 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.08■□□□□ 0.81
Slit1Q80TR4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20.08■□□□□ 0.81
Slit1Q80TR4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slit1Q80TR4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slit1Q80TR4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Slit1Q80TR4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slit1Q80TR4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Slit1Q80TR4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slit1Q80TR4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Slit1Q80TR4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slit1Q80TR4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slit1Q80TR4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Slit1Q80TR4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slit1Q80TR4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slit1Q80TR4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Slit1Q80TR4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slit1Q80TR4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms